c05e2671df8374fd1c1f110f699a5765 *DESCRIPTION
18be51fbf780d315d531c9689776233f *NAMESPACE
035e7715dec01c8506368c30651bf851 *NEWS.md
7a86c88046c4e6e3c71c5be3e16f02de *R/absorbLayer.R
e76fa13186175dc54713cb281759600c *R/add_image.R
59e72735338d04778dbe1d8d31f9d7b1 *R/adjust_colors.R
5aaa41c0f6da81960b6543d8707a50c0 *R/apply_imager_operation.R
9ac2673b7948cec044532753aa5a1cdf *R/assignPixels.R
33e528a65c1d76bb2cfa33b48fbe8cad *R/backgroundCondition.R
3583cc7f66d3b09dea5c32e096a78c36 *R/backgroundIndex.R
bfe70ac6dc1afe7314be808fe692c9c3 *R/blurImage.R
a0fbc1c03442e64192580a1c344eb2df *R/brick_to_array.R
a23dae104eb722ca0d8265c21012413f *R/cielab_coldist.R
13564f409da9838ed655bf988530f07d *R/cimgConversions.R
ebfeafe9dccc6238de9777815b022dbc *R/collapse_expand.R
2243a66859e05f020f4430221def1761 *R/colorClusters.R
b0e0a7865b9360213b9ec68bb07ab877 *R/colorResiduals.R
426b99b72d05f0e3e93b00b256dcbd64 *R/constructImage.R
ae73affdcde6d44b69ba3600b411e2c6 *R/editLayers.R
db7a206c47ef2cdbecf5d211842f7595 *R/hclust_color.R
b336ebfc8099ffa4dbb4659e11e7eb01 *R/imDist.R
34c4ad06246bfe0a2fc72ea9049d254c *R/imposeColors.R
fc74012ce5a219823529affa1ecd95af *R/medianColors.R
b49b6fe5d1c510ecfa7580845edff647 *R/mergeLayers.R
0e9c2837bfd6f77b95d447696fbc372d *R/pixelAssignMatrix.R
942ee45a22a155e1bd39b37973fe9842 *R/plotColorClusters.R
0c9698f1a64e7f0e1a18aa8d9713812a *R/plotColorPalette.R
0acb30563eca6b43201a4a0d8ee13489 *R/plotImageArray.R
97b0f8999c4c46047d6503777c706686 *R/plot_recolorize.R
0e248ee390d0e37ea5175d524461e709 *R/raster_array_conversions.R
9db1159c171818bdea4fb9696116c916 *R/readImage.R
3c37f90f62272f2712b77baaa78091c6 *R/recluster.R
40930f70aaac4bdd0e11481501dfcec8 *R/recolorImage.R
0f0b88b037ef48153b8e97c395a0bcb5 *R/recolorize-package.R
7d342fe8d7320540f0fccbcaa2f5e6fb *R/recolorize.R
f9d15f155ceb3aae4b8a67708c4c3789 *R/recolorize2.R
e3a1fa753a2f6fe476be4baab0fcf647 *R/recolorizeVector.R
4583ea78b7ece8effe101cb1d4f57263 *R/recolorize_adjacency.R
944f8b887a1f16aa52dbf7826b28ad08 *R/recolorize_to_patternize.R
33865dde50f1504c90909a36665b0349 *R/recolorize_to_png.R
eb94d5eea544406eb013ae5134ef0e1a *R/reorder_colors.R
b5f37b46122890b31d21f26a985f5960 *R/rerun_recolorize.R
cb7d16aaf769893e0be57234fe8705a7 *R/splitByColor.R
8bf2dcf2d3ba56090e047d2644d18fcb *R/thresholdRecolor.R
e41a804f86dd8fe42401c57ece2ef6b5 *R/wernerColor.R
f0e28e9861caba4c799a61c31b646e39 *README.md
18ff8d2ee1ec80557e49524113de0fb9 *build/vignette.rds
8ad3a87fa62c7bdfe4b531d008c972a8 *data/werner.rda
9e50e1ef01eb81d015101c2d870d9c4c *inst/doc/Introduction.R
8fed19fbe8e1456baa8efb11ce3023f2 *inst/doc/Introduction.Rmd
23c40566667019c420597f5859af2cf8 *inst/doc/Introduction.html
21a6e54a7e91eacfeea9a361a51760ae *inst/doc/step00_prep.R
60228d49be9de0c9fac9568467473c6d *inst/doc/step00_prep.Rmd
f15d0d2cdbde5ad8cf9ca2f298535620 *inst/doc/step00_prep.html
81742c36f2355f4b7fb77fc4e82ade30 *inst/doc/step01_loading.R
6c4995b7f2a156ba709ec8d30c97efdc *inst/doc/step01_loading.Rmd
ab4bf1507e9ed752883c500925c4852f *inst/doc/step01_loading.html
781adfce08dc726047d5beb573c0dc50 *inst/doc/step02_initial_cluster.R
bff1805d355f440b7454400d5cf1a174 *inst/doc/step02_initial_cluster.Rmd
28f68d7efb962ddc185ac7cd45b3846f *inst/doc/step02_initial_cluster.html
e516467b59012db648befba2f0699415 *inst/doc/step03_refinement.R
30a60bdb5aca0788f24c293acd0b80c6 *inst/doc/step03_refinement.Rmd
5a4cceaba0426f5c650f0e0b1aada04c *inst/doc/step03_refinement.html
a5de852610e49c86db6477ab8d05aa32 *inst/doc/step04_manual_tweak.R
0d3f7d619f13744799913246787bbb6e *inst/doc/step04_manual_tweak.Rmd
83e0c4a393141beddf38a4c0775cee91 *inst/doc/step04_manual_tweak.html
275bd7682ea63db89ef9429a923b89b5 *inst/doc/step05_visualization_export.R
4cda18714beae24c7fccea6d40ac1d3e *inst/doc/step05_visualization_export.Rmd
6979e6af9c1236985d7a8659c0c06ba5 *inst/doc/step05_visualization_export.html
2b05f9c8341e27616949ceb2a0a5b782 *inst/extdata/chongi.png
76ac647666fec1525dd8fa0b8e5fa323 *inst/extdata/corbetti.png
f2dbf33eeefba84056a157050ef8eeb0 *inst/extdata/ephippigera.png
dd7850ae4e2be590a708de5add35a58f *inst/extdata/fulgidissima.png
3ddcfbb596935800bf9913777bfd6b7f *inst/extdata/msc/chongi_white.jpg
9a7ab922895705a82e568194f9368bb7 *inst/extdata/msc/corbetti_vector.rds
a9f385c5e92eed27cd78370851b38b74 *inst/extdata/ocellata.png
ca8c8372048ffb5b4aa768e26258304b *man/absorbLayer.Rd
9d04ec25dd33625e9c2a71478d3fede3 *man/add_image.Rd
7e9116fe7a3aa0117b2cbb759826db02 *man/adjust_color.Rd
a0e0ad1f22754b172a5dd66602a881e3 *man/apply_imager_operation.Rd
eefb8022ce9d7df2d9d3be0db228813a *man/array_to_RasterStack.Rd
f46639cd97bc3a6af5c0289885f19be8 *man/array_to_cimg.Rd
e18f2e9d6719bb82f4ef62d4c9c367e9 *man/assignPixels.Rd
c4d81d38f2eaa0da97e1d680fe857954 *man/backgroundCondition.Rd
0454e5549d7e7476ff7db6e62e88a8b3 *man/backgroundIndex.Rd
16ed91e26d52daf65c8d46a3353daabe *man/blurImage.Rd
2902d890aa46061607cee717cca85a00 *man/brick_to_array.Rd
4adba20376b555bb7e98b7506daa07af *man/cielab_coldist.Rd
d297f1c2dd6f14c25334bfaec5dc310d *man/cimg_to_array.Rd
1ca377fb0234a7fe95320751763b2bd3 *man/classify_recolorize.Rd
136abf3ddcde22c4ce5753ec9a9c294d *man/clean_merge_params.Rd
66d16a4a5122cc0507e681ca48129562 *man/col2col.Rd
0c6649dae2da1c3bb113763f83e41e0b *man/colorClusters.Rd
603c03abe560e00783ac43638e9fc49f *man/colorClustersHist.Rd
4216ace09e94f2fcd48297a6a1607584 *man/colorClustersKMeans.Rd
5594917cef785acfd99a133e5d312352 *man/colorResiduals.Rd
cb8d9204936f9e76fcd7e95aa601bcec *man/constructImage.Rd
e8c4b67dc83a7ddacb84335d6cb80b7b *man/editLayer.Rd
17f54f56fe8cb325a57df1caff5c57db *man/editLayers.Rd
13bf4083466182887e0174924653671d *man/expand_recolorize.Rd
662d538ae0642499aaa9f16d4c7c669a *man/figures/batch_processing.png
14576b7d063a55d382aa5c4fa2fd0edd *man/figures/kmeans_vs_recolorize.png
542fdb550944255d00f368d4bdd555ad *man/figures/recolorize_corbetti.png
8287d5d0746ab693120400a7afd0d952 *man/hclust_color.Rd
36c4b988e89a8633636ed94873534eb4 *man/imDist.Rd
af5d046bc8ff3e540c3ce52c21ca75c8 *man/imHeatmap.Rd
db242ce4ea18a1416aa08567657e987f *man/imposeColors.Rd
3dee9848a1b808e41d3f95e742f9d29f *man/labelCol.Rd
1f53d4a5fc605d391f9ec5c0ef1deded *man/match_colors.Rd
54844b4b2e83d663fe6f97f9a2569bc3 *man/medianColors.Rd
8fa6d691799dbe40eefd92ddb6826dda *man/mergeLayers.Rd
5d0eb7c9cfaf774afa8f9809282b3b71 *man/pixelAssignMatrix.Rd
ef06cc4ffb0b39e354e8b443080df9c7 *man/plot.recolorize.Rd
98fc613457b0be62ba4371aaebf5b637 *man/plot.recolorizeVector.Rd
ea68fa004d005bd8125c01b88d38ce06 *man/plotColorClusters.Rd
12d20fe96a803207c471d9e58cbb4d40 *man/plotColorPalette.Rd
6e13a792859b6f0194cf2045ed16c5ed *man/plotImageArray.Rd
f39e1e97b70c9e30fd5654aef0c731d0 *man/raster_to_array.Rd
36e767d3c02f136f30d25f920f8a4239 *man/readImage.Rd
d2a0bdbe3eccc5cfc9bab442489efd27 *man/recluster.Rd
8093bb91a2acca15fb9c4b679b900f67 *man/recoloredImage.Rd
3d18272a770cc97ea6c3714a909631ad *man/recolorize-package.Rd
1ad9b2eda74a31ea692a73dd2d4e94f3 *man/recolorize.Rd
2751fac2dc78918221b088a0321a490f *man/recolorize2.Rd
a9d58b95380dbdf2e08889eda4b6b1d6 *man/recolorizeVector.Rd
93e77ebc2ddd3c3b117f80db168eebd1 *man/recolorize_adjacency.Rd
fc86cea3e8cd34bab06a7f4472eb1d9f *man/recolorize_to_patternize.Rd
3232a6578eb9d326a02322221a35622e *man/recolorize_to_png.Rd
cee52c7ad9a9a3a705d159254a4ab8e6 *man/reorder_colors.Rd
1347cf0b6d8347630ad63a8386923bae *man/rerun_recolorize.Rd
71dc89e5d3a3e70d071767d8691acbbf *man/rgb2hsl.Rd
218cfdb28c1549cf4aa2569f17282de1 *man/splitByColor.Rd
7536b0ba1dfe9fc205bcecbf78359b26 *man/thresholdRecolor.Rd
2903348d4d868be01e145b1cb34811b0 *man/werner.Rd
d6901018eae5f0b3872d056f698c35d0 *man/wernerColor.Rd
8fed19fbe8e1456baa8efb11ce3023f2 *vignettes/Introduction.Rmd
60228d49be9de0c9fac9568467473c6d *vignettes/step00_prep.Rmd
6c4995b7f2a156ba709ec8d30c97efdc *vignettes/step01_loading.Rmd
bff1805d355f440b7454400d5cf1a174 *vignettes/step02_initial_cluster.Rmd
30a60bdb5aca0788f24c293acd0b80c6 *vignettes/step03_refinement.Rmd
0d3f7d619f13744799913246787bbb6e *vignettes/step04_manual_tweak.Rmd
4cda18714beae24c7fccea6d40ac1d3e *vignettes/step05_visualization_export.Rmd
