75452bae20dc995ad1899510fb1e81c5 *DESCRIPTION
7ce1fddfa54263a12ed92ea00fbea5b3 *NAMESPACE
1810c9feb511e07e8677aae392729b8f *NEWS.md
c69b6bd90c228e1999c55f6b35ad1e4b *R/convenience_wrappers.R
07360665399d577552ac3cd95c529cee *R/data.R
9a2864b642312cb1e20847b480ac97c6 *R/deprecated.R
e20f1874bfc27da9d9495ae7b45f2dbb *R/fbar.R
69eff3fd2b91e1a1a69c98becd8a2c1f *R/gene_associate.R
e2f42338de534be5daf94a1c8f71fc4d *R/gene_expression_evaluation.R
045aa8e2461267300fea874527344d71 *R/metabolite_utilities.R
9940110fd045b06bf792c4cb3134d83f *R/parsing_and_conversion.R
7f3daaf446a342adf7cbdfa0fdab2b3b *R/utilities.R
8f7e4caeef1491f763ecee40f54a8144 *README.md
4990071f7510020c77895666fd82f395 *build/vignette.rds
d9c76e6acea65bb8fc27324566405d03 *data/ecoli_core.rda
7f1bd88318e9e0e363106cf932be8125 *data/iJO1366.rda
05bfe65a1fa253fcc522a3a4fd2107fd *data/nutrient_types.rda
9b156292175a681c7451690328268d20 *inst/WORDLIST
f984a56b1ff31ecd81f726e9359cdee1 *inst/doc/Introduction.R
0cc76157dc443320e2ea6cf3233446fb *inst/doc/Introduction.Rmd
b5b0ea10040909c3a888efe3b60f52ac *inst/doc/Introduction.html
97dd298b7bd7da02979cb3e9b912209a *inst/doc/Multi-Objective_Optimization_case_study.R
7ff67a38cac1f095381cbb7108c15afd *inst/doc/Multi-Objective_Optimization_case_study.Rmd
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e8ab48a1eee4257bf68700c1b5651383 *inst/doc/Tutorial.R
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b72d1b30c61ba428a701a64b84f8fb52 *inst/extdata/ecoli_core.tsv
34e9bc3813468a908c922b86fa89bd32 *inst/extdata/iJO1366.tsv
fd596135b8b405c3bb568109a253d841 *inst/extdata/nutrient_types.tsv
c2a0e1119796bea41b0551849460bf40 *man/decompose_metabolites.Rd
b0fcabd45ac54f0cc18bea210d90016d *man/ecoli_core.Rd
7c0ce6de5f6493f8536220b1da532ff0 *man/expanded_to_ROI.Rd
01d9f18bfbb05dd31505c5afcf8bcacf *man/expanded_to_glpk.Rd
bfd46f31708dd56763462483c4a4e120 *man/expanded_to_gurobi.Rd
76e834c9c38bfd6b6c832f52c63c835a *man/expanded_to_reactiontbl.Rd
aef230629a7a43a1583e2eed8af6879d *man/fbar.Rd
867c28a7e8b0534d841c909d37b0e23b *man/find_flux_variability_df.Rd
f82c9649464b74155e19e06a79501663 *man/find_fluxes_df.Rd
1814228d47b02af86ae0489564ffab5b *man/gene_associate.Rd
cb3b7a7854377c17924472fc2df05161 *man/gene_eval.Rd
51febeb91987688eb803390c9bf73a46 *man/get_BiGG.Rd
afac0ea6e29ea9f90089b8890b3faa2c *man/iJO1366.Rd
c7ba357553ac4499862c836824c46ac6 *man/nutrient_types.Rd
38a530eb583f031d2fe724f9f0a46214 *man/parse_met_list.Rd
82332150d9c1d3de3b062058d0eabca3 *man/reactiontbl_to_expanded.Rd
de225628a0802d34ec5dd4e8ac8f2615 *man/reactiontbl_to_gurobi.Rd
4db866d678271f5cd820207843ecb4aa *man/recompose_metabolites.Rd
3f8b5db0453ac72f6b769d0bb85a9af3 *man/split_on_arrow.Rd
e085d3421db510c5ee56fed3450d0f44 *man/validate_expanded.Rd
78a7f421feb7208c58c9197ba4eb5edb *tests/spelling.R
7031aa2113b93166295980ecdfff1905 *tests/testthat.R
fce019606235804eb6059c238679ab6b *tests/testthat/test-ROI.R
8fa28521fc9345e1e5f229038c419064 *tests/testthat/test-ROI_plugins.R
5a6483e2a8e4281c7db5cc85d4bef224 *tests/testthat/test-convenience.R
ea6c28b21fe16077af9275a295ac5fdb *tests/testthat/test-full-size.R
d25028cbeec98ceff6efd5cfbd0d2db1 *tests/testthat/test-gene_expression_processing.R
692c1328f0f53707d7d010a37c6b4660 *tests/testthat/test-metabolite-parsing.R
73e4b888e6519c4dbb9afbbeae95a036 *tests/testthat/test-parsing_and_conversion.R
56f7ca6325243eef30b48957a49d5ada *tests/testthat/test-utilities.R
0cc76157dc443320e2ea6cf3233446fb *vignettes/Introduction.Rmd
7ff67a38cac1f095381cbb7108c15afd *vignettes/Multi-Objective_Optimization_case_study.Rmd
42ebcf701ebc838899a21fb9ccef32fe *vignettes/Tutorial.Rmd
