bd64afb0a4550d28bfd9a999530c92ba *DESCRIPTION
caf068c45f8b5fbb7d37083f5c4e5927 *NAMESPACE
9f17105c4616b5df0ec793444ea0ab24 *R/get_heteroplasmy.R
995a324be89649b344febdaaeccd3d39 *R/get_raw_counts_allele.R
49e2095d20eb25fcbb8ba4515ca0d3c6 *R/lineage_tracing.R
2ce032e5137c0beaa3d424f5c709d714 *R/other_functions.R
e8890b0d16cf39a359a329e1b140a8b5 *R/plotting_functions.R
198d7a98c1639f7fd25e7209f2267720 *R/statistical_test.R
18a74a6e5f4548713fb64fe39fb56f1e *R/utils.R
fcaefdecc1bf7fd2283c67e3d08dd2dd *README.md
16142b022c166bf4c9002220cc6f7c18 *build/vignette.rds
383666f88e081658dd418123027ab8c4 *inst/doc/MitoHEAR.R
f07e568bb714ac606502c963831d710b *inst/doc/MitoHEAR.Rmd
cf6da99775ac1c3e38b768f038241c8b *inst/doc/MitoHEAR.html
eba6a21a83df3bafcc9fa34bd803f1e1 *inst/extdata/meta_data_antonio_final.Rda
daabea9eff220a9ba475e6b61897a418 *inst/extdata/output_SNP_antonio_mt.Rda
cb74286cda5fb520982b500f3b175668 *man/choose_features_clustering.Rd
f775bfad920c08fbf6c8608bee59d83d *man/clustering_angular_distance.Rd
3740334f493d040567e3c53d04e06db0 *man/detect_insertion.Rd
e7b9115a63f9c14cba2246df6a0b9f16 *man/dpt_test.Rd
e6b32eda75bbbd1e36fe402cf394dfd6 *man/filter_bases.Rd
f15110a270f80b0adfa507bf8f383c97 *man/get_distribution.Rd
203099a924854f6917ac9477a812212e *man/get_heteroplasmy.Rd
3cc099263cb08069bb03c413e867f7e8 *man/get_raw_counts_allele.Rd
8004f5d768122c6a9d44e3fb9833ded5 *man/get_wilcox_test.Rd
110f839a50f6130f1710262eaaef3f85 *man/plot_allele_frequency.Rd
635e5c09f2511724ac5874203be05d8d *man/plot_base_coverage.Rd
07c2c2f45b3d2db5b4f38b55a8f70009 *man/plot_batch.Rd
971bf113bf7cfea22bb4eb9d3ff0737b *man/plot_cells_coverage.Rd
609b55e81904a72ffaadbb072d08de1b *man/plot_condition.Rd
eea2e969dc7790a3e4ee482455f4c5f6 *man/plot_coordinate_cluster.Rd
a5f4b2eb1acdfb5b61fc57b7aed58627 *man/plot_coordinate_heteroplasmy.Rd
6681a372844d0d6bacb5f9599515dd90 *man/plot_correlation_bases.Rd
61d96871d29161e2c58984f23a33d9bc *man/plot_distance_matrix.Rd
affb19b19f09c4aa51da6f8598edb65b *man/plot_distribution.Rd
f75837bde80eeee77f730715f35b1862 *man/plot_dpt.Rd
3848d464522f4b918c20a09b14d3b55a *man/plot_genome_coverage.Rd
f7c864d13a997f8b92ba5b7ccbd2fc73 *man/plot_heatmap.Rd
16b17b4a40de8dd69a505eba0dae1b66 *man/plot_heteroplasmy.Rd
a3a4d246503ea0b613e67ae0d63cc6f2 *man/plot_heteroplasmy_variability.Rd
6910068be43cfe732e81c074b5248a18 *man/plot_spider_chart.Rd
fd1071fad0df2febc302b28239f138db *man/vi_comparison.Rd
1a966c79404ac5bdc05eabe94f5eef2e *tests/testthat.R
5d353b1d9c1b1c804311d015e67d0a7a *tests/testthat/test_clustering_angular_distance.R
1d068f1c59a3999efe4f365b790bfc24 *tests/testthat/test_get_heteroplasmy.R
f07e568bb714ac606502c963831d710b *vignettes/MitoHEAR.Rmd
