# Retrieve, Transform and Analyze the Barcode of Life Data Systems Data

## Documentation for package ‘BOLDconnectR’ version 1.0.1

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

bold.analyze.align | Transform and align the sequence data retrieved from BOLD
bold.analyze.diversity | Create a biodiversity profile of the retrieved data
bold.analyze.map | Visualize BIN occurrence data on maps
bold.analyze.tree | Analyze and visualize the multiple sequence alignment
bold.apikey | Set the BOLD private data API key
bold.data.summarize | Generate specific summaries from the downloaded BCDM data
bold.export | Export files generated by BOLDconnectR
bold.fetch | Retrieve data from the BOLD database
bold.fields.info | Retrieve metadata of the BOLD data fields
bold.full.search | Search user based (private) and publicly available data on the BOLD database
bold.public.search | Search publicly available data on the BOLD database
test.data | Canadian spider data by Blagoev et al.(2015)
test.data2 | Example Barcode Core Data Model (BCDM) dataset