# Disease-Drived Differential Proteins Co-Expression Network Analysis

## Documentation for package ‘DDPNA’ version 0.4.1

- DESCRIPTION file
- Package README

## Help Pages

DDPNA-package | Disease-drived Differential Proteins And Proteomic Co-expression Network Associated Analysis
anova_p | anova_p
changedID | changedID
dataStatInf | dataStatInf
Data_impute | Data_impute
DDPNA | Disease-drived Differential Proteins And Proteomic Co-expression Network Associated Analysis
DEPsets | DEPsets
DEP_Mod_HeatMap | DEP_Mod_HeatMap
DEP_Mod_net_plot | DEP_Mod_net_plot
fc.pos | fc.pos
FCSenrichplot | FCSenrichplot
getmoduleHub | getmoduleHub
groupmean | groupmean
ID_match | homolog protein Uniprot ID transformation
MaxQdataconvert | one-step to extract 'Maxquant' quantification data and convert
MaxQprotein | read proteomic quantification data and seperate the protein information and quantification information.
ME_inf | module eigengenes information
modpcomp | modpcomp
moduleID | extract intersection ID between dataset and module
Module_Enrich | Module_Enrich
Module_inf | Module and protein information.
multi.t.test | multi.t.test
P.G.extract | Protein Groups information extract.
rename_dupnewID | rename_dupnewID
single_mod_enrichplot | single_mod_enrichplot
SoftThresholdScaleGraph | SoftThresholdScaleGraph
wgcnatest | wgcnatest