# Estimate Location-Scale Joint Models

## Documentation for package ‘LSJM’ version 0.1.0

- DESCRIPTION file.
- Package NEWS.

## Help Pages

data.manag.long | Management of longitudinal data
data.manag.sigma | Management of data for residual part
data.manag.surv | Management of survival data
dynpred | dynpred: compute the dynamic predictions of an event.
dynpred.lsjm_classicCR | dynpred: compute the dynamic predictions of an event.
dynpred.lsjm_classicIDM | dynpred: compute the dynamic predictions of an event.
dynpred.lsjm_classicSingle | dynpred: compute the dynamic predictions of an event.
dynpred.lsjm_covDepCR | dynpred: compute the dynamic predictions of an event.
dynpred.lsjm_covDepIDM | dynpred: compute the dynamic predictions of an event.
dynpred.lsjm_covDepSingle | dynpred: compute the dynamic predictions of an event.
dynpred.lsjm_interintraCR | dynpred: compute the dynamic predictions of an event.
dynpred.lsjm_interintraIDM | dynpred: compute the dynamic predictions of an event.
dynpred.lsjm_interintraSingle | dynpred: compute the dynamic predictions of an event.
initial.long | Initialisation of Longitudinal Submodel
lsjm | lsjm : Estimation of a location-scale joint model for longitudinal data with flexible subject-specific variability and complex survival structures
lsmm | lsmm : Estimation of a linear mixed model for longitudinal data with flexible subject-specific variability.
plot.lsjm | plot: Plot methods for 'lsjm' or 'lsmm' objects
plot.lsjm_classicCR | plot: Plot methods for 'lsjm' or 'lsmm' objects
plot.lsjm_classicIDM | plot: Plot methods for 'lsjm' or 'lsmm' objects
plot.lsjm_classicSingle | plot: Plot methods for 'lsjm' or 'lsmm' objects
plot.lsjm_covDepCR | plot: Plot methods for 'lsjm' or 'lsmm' objects
plot.lsjm_covDepIDM | plot: Plot methods for 'lsjm' or 'lsmm' objects
plot.lsjm_covDepSingle | plot: Plot methods for 'lsjm' or 'lsmm' objects
plot.lsjm_interintraCR | plot: Plot methods for 'lsjm' or 'lsmm' objects
plot.lsjm_interintraIDM | plot: Plot methods for 'lsjm' or 'lsmm' objects
plot.lsjm_interintraSingle | plot: Plot methods for 'lsjm' or 'lsmm' objects
plot.lsmm_classic | plot: Plot methods for 'lsjm' or 'lsmm' objects
plot.lsmm_covDep | plot: Plot methods for 'lsjm' or 'lsmm' objects
plot.lsmm_interintra | plot: Plot methods for 'lsjm' or 'lsmm' objects
predict.lsjm | predict: Prediction of some quantities for each subjects
predict.lsjm_classicCR | predict: Prediction of some quantities for each subjects
predict.lsjm_classicIDM | predict: Prediction of some quantities for each subjects
predict.lsjm_classicSingle | predict: Prediction of some quantities for each subjects
predict.lsjm_covDepCR | predict: Prediction of some quantities for each subjects
predict.lsjm_covDepIDM | predict: Prediction of some quantities for each subjects
predict.lsjm_covDepSingle | predict: Prediction of some quantities for each subjects
predict.lsjm_interintraCR | predict: Prediction of some quantities for each subjects
predict.lsjm_interintraIDM | predict: Prediction of some quantities for each subjects
predict.lsjm_interintraSingle | predict: Prediction of some quantities for each subjects
predict.lsmm_classic | predict: Prediction of some quantities for each subjects
predict.lsmm_covDep | predict: Prediction of some quantities for each subjects
predict.lsmm_interintra | predict: Prediction of some quantities for each subjects
ranef | ranef: the predicted random effects for all subjects
ranef.lsjm_classicCR | ranef: the predicted random effects for all subjects
ranef.lsjm_classicIDM | ranef: the predicted random effects for all subjects
ranef.lsjm_classicSingle | ranef: the predicted random effects for all subjects
ranef.lsjm_covDepCR | ranef: the predicted random effects for all subjects
ranef.lsjm_covDepIDM | ranef: the predicted random effects for all subjects
ranef.lsjm_covDepSingle | ranef: the predicted random effects for all subjects
ranef.lsjm_interintraCR | ranef: the predicted random effects for all subjects
ranef.lsjm_interintraIDM | ranef: the predicted random effects for all subjects
ranef.lsjm_interintraSingle | ranef: the predicted random effects for all subjects
ranef.lsmm_classic | ranef: the predicted random effects for all subjects
ranef.lsmm_covDep | ranef: the predicted random effects for all subjects
ranef.lsmm_interintra | ranef: the predicted random effects for all subjects
survmarg | The population-average probability of being free of any events at a given time $t$ and covariates
survmarg.lsjm_classicCR | The population-average probability of being free of any events at a given time $t$ and covariates
survmarg.lsjm_classicIDM | The population-average probability of being free of any events at a given time $t$ and covariates
survmarg.lsjm_classicSingle | The population-average probability of being free of any events at a given time $t$ and covariates
survmarg.lsjm_covDepCR | The population-average probability of being free of any events at a given time $t$ and covariates
survmarg.lsjm_covDepIDM | The population-average probability of being free of any events at a given time $t$ and covariates
survmarg.lsjm_covDepSingle | The population-average probability of being free of any events at a given time $t$ and covariates
survmarg.lsjm_interintraCR | The population-average probability of being free of any events at a given time $t$ and covariates
survmarg.lsjm_interintraIDM | The population-average probability of being free of any events at a given time $t$ and covariates
survmarg.lsjm_interintraSingle | The population-average probability of being free of any events at a given time $t$ and covariates
threeC | ThreeC dataset