all_resolutions_plots	all_resolutions_plots
area_estimate_ploidy	area_estimate_ploidy
clean_summary	clean_summary
find_header_line	find_header_line
get_aneuploids	get_aneuploids
get_baf	get_baf
get_baf_par	get_baf_par
get_centers	get_centers
get_R_theta	get_R_theta
get_zscore	get_zscore
is_compressed_file	is_compressed_file
merge_arms_format	merge_arms_format
mode	mode
pascalTriangle	pascalTriangle
plot_baf	plot_baf
plot_baf_hist	plot_baf_hist
plot_baf_with_ploidy_guides	plot_baf_with_ploidy_guides
plot_qploidy_standardization	plot_qploidy_standardization
plot_xy_with_ploidy_guides	plot_xy_with_ploidy_guides
print.qploidy_area_ploidy_estimation	print.qploidy_area_ploidy_estimation
print.qploidy_standardization	print.qploidy_standardization
qploidy_read_vcf	qploidy_read_vcf
read_axiom	read_axiom
read_illumina_array	read_illumina_array
read_qploidy_standardization	read_qploidy_standardization
rm_outlier	rm_outlier
simulate_axiom_summary	simulate_axiom_summary
simulate_illumina_file	simulate_illumina_file
simulate_standardization_input	simulate_standardization_input
simulate_vcf	simulate_vcf
standardize	standardize
summary_to_fitpoly	summary_to_fitpoly
updog_centers	updog_centers
vcf_sanity_check	vcf_sanity_check
write_qploidy_standardization	write_qploidy_standardization
