R: Import Data from EDC Software

# Import Data from EDC Software

## Documentation for package ‘EDCimport’ version 0.6.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

assert_no_duplicate | Assert that a dataframe has one row per patient
assert_no_rows | Standardized warning system
check_subjid | Check the validity of the subject ID column
crf_status_plot | Show the current CRF status distribution
edc_browse_excel | Save the database as an Excel file
edc_clean_names | Clean up the names of all datasets
edc_crf_plot | Show the current CRF status distribution
edc_database | EDCimport Database
edc_data_stop | Standardized warning system
edc_data_warn | Standardized warning system
edc_data_warnings | Standardized warning system
edc_db_to_excel | Save the database as an Excel file
edc_example | Example database
edc_example_plot | Example database
edc_find_column | Search the whole database
edc_find_value | Search the whole database
edc_full_join | Join within the EDCimport framework
edc_inform_code | Shows how many code you wrote
edc_left_join | Join within the EDCimport framework
edc_lookup | Retrieve the lookup table from options
edc_options | Set global options for 'EDCimport'
edc_pal_crf | Show the current CRF status distribution
edc_patient_gridplot | Patient gridplot
edc_peek_options | See which 'EDCimport' option is currently set
edc_population_plot | Plot the populations
edc_reset_options | Reset all 'EDCimport' options
edc_right_join | Join within the EDCimport framework
edc_split_mixed | Split mixed datasets
edc_swimmerplot | Swimmer plot of all dates columns
edc_unify_subjid | Harmonize the subject ID of the database
edc_viewer | Shiny data explorer
edc_warn_extraction_date | Warn if extraction is too old
edc_warn_patient_diffs | Check the validity of the subject ID column
fct_yesno | Format factor levels as Yes/No
find_keyword | Search the whole database
get_common_cols | Get columns that are common to multiple datasets
get_datasets | Retrieve the datasets as a list of data.frames
get_lookup | Retrieve the lookup table from options
harmonize_subjid | Harmonize the subject ID of the database
lastnews_table | Get a table with the latest date for each patient
load_database | Load a list in an environment
load_list | Load a list in an environment
manual_correction | Manual correction
read_all_csv | Read all '.csv' files in a directory
read_all_sas | Read all '.sas7bdat' files in a directory
read_all_xpt | Read all '.xpt' files in a directory
read_tm_all_xpt | Read all '.xpt' files in a directory
read_trialmaster | Read the '.zip' archive of a TrialMaster export
reset_manual_correction | Manual correction
save_edc_data_warnings | Save EDCimport warning to Excel
save_plotly | Save a plotly to an HTML file
save_sessioninfo | Save 'sessionInfo()' output
search_for_newer_data | Search for newer data
select_distinct | Select only distinct columns
set_project_name | Set the project name
summary.common_cols | Get columns that are common to multiple datasets
table_format | Identify if a dataframe has a long or a wide format
unify | Unify a vector