speedytax: Rapidly Import Classifier Results into 'phyloseq'

Import classification results from the 'RDP Classifier' (Ribosomal Database Project),' 'USEARCH sintax,' 'vsearch sintax' and the 'QIIME2' (Quantitative Insights into Microbial Ecology) classifiers into 'phyloseq' tax_table objects.

Version: 1.0.4
Imports: dplyr, phyloseq, Rcpp, stringr, tibble, tidyr
LinkingTo: Rcpp
Published: 2024-05-14
DOI: 10.32614/CRAN.package.speedytax
Author: John Quensen ORCID iD [aut, cre, cph]
Maintainer: John Quensen <quensenj at msu.edu>
License: MIT + file LICENSE
NeedsCompilation: yes
Materials: README, NEWS
CRAN checks: speedytax results

Documentation:

Reference manual: speedytax.html , speedytax.pdf

Downloads:

Package source: speedytax_1.0.4.tar.gz
Windows binaries: r-devel: speedytax_1.0.4.zip, r-release: speedytax_1.0.4.zip, r-oldrel: speedytax_1.0.4.zip
macOS binaries: r-release (arm64): speedytax_1.0.4.tgz, r-oldrel (arm64): speedytax_1.0.4.tgz, r-release (x86_64): speedytax_1.0.4.tgz, r-oldrel (x86_64): speedytax_1.0.4.tgz
Old sources: speedytax archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=speedytax to link to this page.