Creates 'graphs' of species associations (interactions) and ordination biplots from
co-occurrence data by fitting discrete gaussian copula graphical models. Methods described in
Popovic, GC., Hui, FKC., Warton, DI., (2018) <doi:10.1016/j.jmva.2017.12.002>.
| Version: |
1.0.2 |
| Depends: |
R (≥ 3.5.0), mvabund (≥ 4.2) |
| Imports: |
glasso, plyr, sna, MASS, tweedie, igraph, betareg, doParallel, mgcv, glm2, ordinal, compiler, foreach, stats |
| Suggests: |
knitr, rmarkdown, testthat, tidyr, ggplot2, RColorBrewer, ggraph, labdsv, tidygraph |
| Published: |
2022-03-02 |
| DOI: |
10.32614/CRAN.package.ecoCopula |
| Author: |
Gordana Popovic [aut, cre],
David Warton [ctb],
Francis K.C. Hui [ctb],
Michelle Lim [ctb] |
| Maintainer: |
Gordana Popovic <g.popovic at unsw.edu.au> |
| License: |
LGPL-2.1 | LGPL-3 [expanded from: LGPL (≥ 2.1)] |
| NeedsCompilation: |
no |
| Citation: |
ecoCopula citation info |
| Materials: |
README, NEWS |
| In views: |
Environmetrics |
| CRAN checks: |
ecoCopula results [issues need fixing before 2025-10-31] |