ddpcr: Analysis and Visualization of Droplet Digital PCR in R and on the Web

An interface to explore, analyze, and visualize droplet digital PCR (ddPCR) data in R. This is the first non-proprietary software for analyzing two-channel ddPCR data. An interactive tool was also created and is available online to facilitate this analysis for anyone who is not comfortable with using R.

Version:	1.15.2
Depends:	R (≥ 3.1.0)
Imports:	DT (≥ 0.2), dplyr (≥ 0.5.0), ggplot2 (≥ 2.2.0), lazyeval (≥ 0.1.10), magrittr (≥ 1.5), mixtools (≥ 1.0.2), plyr (≥ 1.8.1), readr (≥ 0.1.0), shiny (≥ 0.11.0), shinydisconnect, shinyjs (≥ 0.4.0), tibble
Suggests:	ggExtra (≥ 0.3.0), graphics, grid (≥ 3.2.2), gridExtra (≥ 2.0.0), knitr (≥ 1.7), rmarkdown, stats, testthat (≥ 0.11.0), utils
Published:	2023-08-20
DOI:	10.32614/CRAN.package.ddpcr
Author:	Dean Attali [aut, cre]
Maintainer:	Dean Attali <daattali at gmail.com>
BugReports:	https://github.com/daattali/ddpcr/issues
License:	MIT + file LICENSE
URL:	https://github.com/daattali/ddpcr, https://daattali.com/shiny/ddpcr/
NeedsCompilation:	no
Materials:	README, NEWS
CRAN checks:	ddpcr results

Documentation:

Reference manual:	ddpcr.html , ddpcr.pdf
Vignettes:	Algorithms in ddpcr analysis (source, R code) Extending ddpcr by adding new plate types (source, R code) Package ddpcr (source, R code) Implementation technical details (source, R code)

Downloads:

Package source:	ddpcr_1.15.2.tar.gz
Windows binaries:	r-devel: ddpcr_1.15.2.zip, r-release: ddpcr_1.15.2.zip, r-oldrel: ddpcr_1.15.2.zip
macOS binaries:	r-release (arm64): ddpcr_1.15.2.tgz, r-oldrel (arm64): ddpcr_1.15.2.tgz, r-release (x86_64): ddpcr_1.15.2.tgz, r-oldrel (x86_64): ddpcr_1.15.2.tgz
Old sources:	ddpcr archive

Reverse dependencies:

Reverse imports:	CDatanet, EFAfactors
Reverse suggests:	RRmorph, RRphylo, vMF

Linking:

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