Creates visualizations of intersecting sets using a novel matrix design, along with visualizations of several common set, element and attribute related tasks (Conway 2017) <doi:10.1093/bioinformatics/btx364>.
| Version: | 1.4.0 |
| Depends: | R (≥ 3.0) |
| Imports: | ggplot2, gridExtra, plyr, utils, stats, methods, grDevices, scales |
| Suggests: | knitr |
| Published: | 2019-05-22 |
| DOI: | 10.32614/CRAN.package.UpSetR |
| Author: | Jake Conway [cre], Nils Gehlenborg [aut] |
| Maintainer: | Jake Conway <jake_conway at hms.harvard.edu> |
| BugReports: | http://github.com/hms-dbmi/UpSetR/issues |
| License: | MIT + file LICENSE |
| URL: | http://github.com/hms-dbmi/UpSetR |
| NeedsCompilation: | no |
| Materials: | README, NEWS |
| CRAN checks: | UpSetR results |
| Reference manual: | UpSetR.html , UpSetR.pdf |
| Vignettes: |
Attribute Plots (source, R code) Basic Usage (source, R code) Querying the Data (source, R code) Incorporating Set Metadata (source, R code) |
| Package source: | UpSetR_1.4.0.tar.gz |
| Windows binaries: | r-devel: UpSetR_1.4.0.zip, r-release: UpSetR_1.4.0.zip, r-oldrel: UpSetR_1.4.0.zip |
| macOS binaries: | r-release (arm64): UpSetR_1.4.0.tgz, r-oldrel (arm64): UpSetR_1.4.0.tgz, r-release (x86_64): UpSetR_1.4.0.tgz, r-oldrel (x86_64): UpSetR_1.4.0.tgz |
| Old sources: | UpSetR archive |
| Reverse imports: | artMS, ASpli, biblioverlap, bulkAnalyseR, dar, DiscoRhythm, fastml, iCOBRA, ideal, inDAGO, ivygapSE, LymphoSeq, MAGAR, MatrixQCvis, mpwR, MultiRNAflow, naniar, plinkQC, PolySTest, PRONE, PTXQC, RFLOMICS, rimu, seqsetvis, tidypopgen, VennDetail, ViSEAGO |
| Reverse suggests: | Cepo, ChIPpeakAnno, distinct, DuplexDiscovereR, fuseMLR, GeneSelectR, ggpicrust2, HMP2Data, HoloFoodR, immunarch, mastR, MetaNeighbor, miceFast, MultiAssayExperiment, MungeSumstats, muscat, OmicNavigator, pcutils, SingleCellMultiModal, smartid, spatialHeatmap, StabMap, systemPipeShiny, TFutils |
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