TreatmentPatterns: Analyzes Real-World Treatment Patterns of a Study Population of Interest
Computes treatment patterns within a given cohort using the Observational Medical Outcomes Partnership (OMOP) common data model (CDM). As described in Markus, Verhamme, Kors, and Rijnbeek (2022) <doi:10.1016/j.cmpb.2022.107081>.
| Version: | 3.1.1 |
| Depends: | R (≥ 4.2) |
| Imports: | checkmate, dplyr, stringr, utils, stats, Andromeda, tidyr, R6, sunburstR, networkD3, htmlwidgets, ggplot2, dbplyr, jsonlite |
| Suggests: | knitr, rmarkdown, tibble, testthat (≥ 3.0.0), usethis, Eunomia, CDMConnector, DatabaseConnector (≥ 6.0.0), SqlRender, CohortGenerator, ResultModelManager, webshot2, CirceR, duckdb, DBI, withr, plotly, PaRe |
| Published: | 2025-08-25 |
| DOI: | 10.32614/CRAN.package.TreatmentPatterns |
| Author: | Aniek Markus 
[aut],
Maarten van Kessel
[cre] |
| Maintainer: | Maarten van Kessel <m.l.vankessel at erasmusmc.nl> |
| BugReports: | https://github.com/darwin-eu/TreatmentPatterns/issues |
| License: | Apache License (≥ 2) |
| URL: | https://github.com/darwin-eu/TreatmentPatterns, https://darwin-eu-dev.github.io/TreatmentPatterns/ |
| NeedsCompilation: | no |
| Language: | en-US |
| Citation: | TreatmentPatterns citation info |
| Materials: | README, NEWS |
| CRAN checks: | TreatmentPatterns results |
Documentation:
| Reference manual: | TreatmentPatterns.html , TreatmentPatterns.pdf |
| Vignettes: |
Best practices (source, R code) DefiningCohorts (source, R code) Computing Pathways (source, R code) Exporing Results (source, R code) Evaluating Output (source, R code) ComputingTreatmentPathways (source, R code) |
Downloads:
| Package source: | TreatmentPatterns_3.1.1.tar.gz |
| Windows binaries: | r-devel: TreatmentPatterns_3.1.1.zip, r-release: TreatmentPatterns_3.1.1.zip, r-oldrel: TreatmentPatterns_3.1.1.zip |
| macOS binaries: | r-release (arm64): TreatmentPatterns_3.1.1.tgz, r-oldrel (arm64): TreatmentPatterns_3.1.1.tgz, r-release (x86_64): TreatmentPatterns_3.1.1.tgz, r-oldrel (x86_64): TreatmentPatterns_3.1.1.tgz |
| Old sources: | TreatmentPatterns archive |
Linking:
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