RNAseqQC: Quality Control for RNA-Seq Data
Functions for semi-automated quality control of bulk RNA-seq data.
| Version: | 0.2.1 |
| Depends: | R (≥ 4.0) |
| Imports: | AnnotationHub, AnnotationFilter, BiocGenerics, ensembldb, circlize, DESeq2, SummarizedExperiment, ComplexHeatmap, matrixStats, grid, ggpointdensity, ggrepel, ggplot2, cowplot, patchwork, purrr, dplyr, stringr, tidyr, tibble, tidyselect, magrittr |
| Suggests: | rmarkdown, knitr, recount3, apeglm, ggrastr, gghighlight |
| Published: | 2024-07-15 |
| DOI: | 10.32614/CRAN.package.RNAseqQC |
| Author: | Frederik Ziebell [cre],
Frederik Ziebell 
[aut],
GlaxoSmithKline Research & Development Limited [cph] (GlaxoSmithKline
Research & Development Limited; registered address: 980 Great West
Road, Brentford, Middlesex TW8 9GS, United Kingdom) |
| Maintainer: | Frederik Ziebell <f_ziebell at web.de> |
| BugReports: | https://github.com/frederikziebell/RNAseqQC/issues |
| License: | Apache License (≥ 2) |
| URL: | https://github.com/frederikziebell/RNAseqQC |
| NeedsCompilation: | no |
| Materials: | README, NEWS |
| CRAN checks: | RNAseqQC results |
Documentation:
| Reference manual: | RNAseqQC.html , RNAseqQC.pdf |
| Vignettes: |
Creating The Example Data Set (source, R code) RNA-seq Quality Control (source, R code) |
Downloads:
| Package source: | RNAseqQC_0.2.1.tar.gz |
| Windows binaries: | r-devel: RNAseqQC_0.2.1.zip, r-release: RNAseqQC_0.2.1.zip, r-oldrel: RNAseqQC_0.2.1.zip |
| macOS binaries: | r-release (arm64): RNAseqQC_0.2.1.tgz, r-oldrel (arm64): RNAseqQC_0.2.1.tgz, r-release (x86_64): RNAseqQC_0.2.1.tgz, r-oldrel (x86_64): RNAseqQC_0.2.1.tgz |
| Old sources: | RNAseqQC archive |
Linking:
Please use the canonical form https://CRAN.R-project.org/package=RNAseqQC to link to this page.