LocaTT: Geographically-Conscious Taxonomic Assignment for Metabarcoding
A bioinformatics pipeline for performing taxonomic assignment of DNA metabarcoding sequence data while considering geographic location. A detailed tutorial is available at <https://urodelan.github.io/Local_Taxa_Tool_Tutorial/>. A manuscript describing these methods is in preparation.
| Version: | 1.1.2 |
| Imports: | utils, stats |
| Suggests: | taxize |
| Published: | 2024-09-05 |
| DOI: | 10.32614/CRAN.package.LocaTT |
| Author: | Kenen Goodwin 
[aut, cre],
Taal Levi [aut] |
| Maintainer: | Kenen Goodwin <urodelan at gmail.com> |
| BugReports: | https://github.com/Urodelan/LocaTT/issues |
| License: | GPL (≥ 3) |
| URL: | https://github.com/Urodelan/LocaTT |
| NeedsCompilation: | no |
| Citation: | LocaTT citation info |
| Materials: | README |
| CRAN checks: | LocaTT results |
Documentation:
| Reference manual: | LocaTT.html , LocaTT.pdf |
Downloads:
| Package source: | LocaTT_1.1.2.tar.gz |
| Windows binaries: | r-devel: LocaTT_1.1.2.zip, r-release: LocaTT_1.1.2.zip, r-oldrel: LocaTT_1.1.2.zip |
| macOS binaries: | r-release (arm64): LocaTT_1.1.2.tgz, r-oldrel (arm64): LocaTT_1.1.2.tgz, r-release (x86_64): LocaTT_1.1.2.tgz, r-oldrel (x86_64): LocaTT_1.1.2.tgz |
| Old sources: | LocaTT archive |
Linking:
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