DDPNA: Disease-Drived Differential Proteins Co-Expression Network
Analysis
Functions designed to connect disease-related differential proteins and
co-expression network. It provides the basic statics analysis included t test, ANOVA analysis.
The network construction is not offered by the package, you can used 'WGCNA' package which you
can learn in Peter et al. (2008) <doi:10.1186/1471-2105-9-559>. It also provides module analysis
included PCA analysis, two enrichment analysis, Planner maximally filtered graph extraction and
hub analysis.
| Version: |
0.4.1 |
| Depends: |
R (≥ 3.5) |
| Imports: |
stats, ggplot2, ggfun, ggrepel, MEGENA, igraph, Hmisc, utils, grDevices, plyr, scales, grid, VennDiagram |
| Suggests: |
WGCNA, Biostrings, impute, ggfortify |
| Published: |
2025-07-29 |
| DOI: |
10.32614/CRAN.package.DDPNA |
| Author: |
Kefu Liu [aut, cre] |
| Maintainer: |
Kefu Liu <liukefu19 at 163.com> |
| BugReports: |
https://github.com/liukf10/DDPNA/issues |
| License: |
GPL-2 |
| URL: |
https://github.com/liukf10/DDPNA |
| NeedsCompilation: |
no |
| Materials: |
README |
| CRAN checks: |
DDPNA results |
Documentation:
Downloads:
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