Tools to create binary dosage from either VCF or GEN files, merge binary dosage files, and read binary dosage files.
| Version: | 1.0.0 |
| Imports: | Rcpp, digest, prodlim |
| LinkingTo: | Rcpp |
| Suggests: | knitr, rmarkdown, testthat (≥ 2.1.0), covr |
| Published: | 2020-01-13 |
| DOI: | 10.32614/CRAN.package.BinaryDosage |
| Author: | John Morrison [aut, cre], NIEHS [fnd] (P01 CA196559), NIEHS [fnd] (R01 CA201407), NIEHS [fnd] (P30 ES007048), NIEHS [fnd] (P01 HL115606) |
| Maintainer: | John Morrison <jmorr at usc.edu> |
| License: | GPL-3 |
| NeedsCompilation: | yes |
| Materials: | README, NEWS |
| CRAN checks: | BinaryDosage results |
| Reference manual: | BinaryDosage.html , BinaryDosage.pdf |
| Vignettes: |
Binary Dosage Formats (source, R code) Genetic File Information (source, R code) Merging Files (source, R code) Estimating Imputed R-squares (source, R code) Using Binary Dosage files (source, R code) Using GEN Files (source, R code) Using VCF Files (source, R code) |
| Package source: | BinaryDosage_1.0.0.tar.gz |
| Windows binaries: | r-devel: BinaryDosage_1.0.0.zip, r-release: BinaryDosage_1.0.0.zip, r-oldrel: BinaryDosage_1.0.0.zip |
| macOS binaries: | r-release (arm64): BinaryDosage_1.0.0.tgz, r-oldrel (arm64): BinaryDosage_1.0.0.tgz, r-release (x86_64): BinaryDosage_1.0.0.tgz, r-oldrel (x86_64): BinaryDosage_1.0.0.tgz |
| Reverse suggests: | GxEScanR |
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