BiBitR: R Wrapper for Java Implementation of BiBit

A simple R wrapper for the Java BiBit algorithm from "A biclustering algorithm for extracting bit-patterns from binary datasets" from Domingo et al. (2011) <doi:10.1093/bioinformatics/btr464>. An simple adaption for the BiBit algorithm which allows noise in the biclusters is also introduced as well as a function to guide the algorithm towards given (sub)patterns. Further, a workflow to derive noisy biclusters from discoverd larger column patterns is included as well.

Version:	0.3.1
Imports:	stats, foreign, methods, utils, viridis, cluster, dendextend, lattice, grDevices, graphics, randomcoloR, biclust
Published:	2017-06-30
DOI:	10.32614/CRAN.package.BiBitR
Author:	De Troyer Ewoud
Maintainer:	De Troyer Ewoud <ewoud.detroyer at uhasselt.be>
License:	GPL-3
NeedsCompilation:	no
SystemRequirements:	Java
Materials:	README
CRAN checks:	BiBitR results

Documentation:

Reference manual:

BiBitR.html , BiBitR.pdf

Downloads:

Package source:	BiBitR_0.3.1.tar.gz
Windows binaries:	r-devel: BiBitR_0.3.1.zip, r-release: BiBitR_0.3.1.zip, r-oldrel: BiBitR_0.3.1.zip
macOS binaries:	r-release (arm64): BiBitR_0.3.1.tgz, r-oldrel (arm64): BiBitR_0.3.1.tgz, r-release (x86_64): BiBitR_0.3.1.tgz, r-oldrel (x86_64): BiBitR_0.3.1.tgz
Old sources:	BiBitR archive

Reverse dependencies:

Reverse imports:

miRSM

Linking:

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