Last updated on 2025-10-31 00:51:08 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.26 | 260.99 | 274.25 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.45 | 253.33 | 263.78 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 85.00 | 308.08 | 393.08 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.09 | 247.00 | 260.09 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.93 | 258.75 | 273.68 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 13.00 | 191.00 | 204.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 187.00 | 209.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 12.00 | 214.00 | 226.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 239.00 | 263.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/146s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.539, system: 0.041, elapsed: 2.272 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.496, system: 0.091, elapsed: 15.501 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.016, elapsed: 0.347 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.898, system: 0.203, elapsed: 6.894 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.004, elapsed: 0.256 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.867, system: 0.381, elapsed: 26.219 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.621, system: 0.052, elapsed: 2.514 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.786, system: 0.365, elapsed: 14.164 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.021, elapsed: 0.311 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.328, system: 0.357, elapsed: 6.735 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.010, elapsed: 0.262 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.689, system: 0.852, elapsed: 24.860 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.904, system: 0.107, elapsed: 2.926 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.559, system: 0.123, elapsed: 14.346 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.013, elapsed: 0.391 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.868, system: 0.180, elapsed: 6.269 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.004, elapsed: 0.393 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.198, system: 0.205, elapsed: 1.557 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.522, system: 0.661, elapsed: 26.960 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.589, system: 0.035, elapsed: 4.853 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.507, system: 0.116, elapsed: 26.573 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.015, elapsed: 0.490 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.113, system: 0.238, elapsed: 6.977 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.005, elapsed: 0.320 seconds]
Starting 50 permutations...
... serially ...
|
| | 0%
|
|== | 2%
|
|=== | 4%
|
|===== | 6%
|
|====== | 8%
|
|======== | 10%
|
|========== | 12%
|
|=========== | 14%
|
|============= | 16%
|
|============== | 18%
|
|================ | 20%
|
|================== | 22%
|
|=================== | 24%
|
|===================== | 26%
|
|====================== | 28%
|
|======================== | 30%
|
|========================== | 32%
|
|=========================== | 34%
|
|============================= | 36%
|
|============================== | 38%
|
|================================ | 40%
|
|================================== | 42%
|
|=================================== | 44%
|
|===================================== | 46%
|
|====================================== | 48%
|
|======================================== | 50%
|
|========================================== | 52%
|
|=========================================== | 54%
|
|============================================= | 56%
|
|============================================== | 58%
|
|================================================ | 60%
|
|================================================== | 62%
|
|=================================================== | 64%
|
|===================================================== | 66%
|
|====================================================== | 68%
|
|======================================================== | 70%
|
|========================================================== | 72%
|
|=========================================================== | 74%
|
|============================================================= | 76%
|
|============================================================== | 78%
|
|================================================================ | 80%
|
|================================================================== | 82%
|
|=================================================================== | 84%
|
|===================================================================== | 86%
|
|====================================================================== | 88%
|
|======================================================================== | 90%
|
|========================================================================== | 92%
|
|=========================================================================== | 94%
|
|============================================================================= | 96%
|
|============================================================================== | 98%
|
|================================================================================| 100%
... computing probabilities from permuted values ...
... done. [user: 10.960, system: 0.537, elapsed: 18.968 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.199, system: 0.985, elapsed: 59.611 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [82s/131s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.637, system: 0.045, elapsed: 2.680 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.469, system: 0.081, elapsed: 14.652 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.014, elapsed: 0.271 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.658, system: 0.184, elapsed: 5.231 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.006, elapsed: 0.262 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.684, system: 0.357, elapsed: 23.942 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.649, system: 0.035, elapsed: 2.672 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.485, system: 0.085, elapsed: 16.191 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.011, elapsed: 0.236 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.816, system: 0.179, elapsed: 5.860 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.005, elapsed: 0.338 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.876, system: 0.353, elapsed: 26.178 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.666, system: 0.037, elapsed: 2.798 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.406, system: 0.122, elapsed: 15.050 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.011, elapsed: 0.264 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.762, system: 0.174, elapsed: 6.134 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.017, elapsed: 0.258 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.133, system: 0.264, elapsed: 1.082 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.000, system: 0.662, elapsed: 26.604 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.629, system: 0.038, elapsed: 2.694 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.466, system: 0.082, elapsed: 14.292 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.013, elapsed: 0.360 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.764, system: 0.176, elapsed: 6.815 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.005, elapsed: 0.353 seconds]
Starting 50 permutations...
... serially ...
|
| | 0%
|
|== | 2%
|
|=== | 4%
|
|===== | 6%
|
|====== | 8%
|
|======== | 10%
|
|========== | 12%
|
|=========== | 14%
|
|============= | 16%
|
|============== | 18%
|
|================ | 20%
|
|================== | 22%
|
|=================== | 24%
|
|===================== | 26%
|
|====================== | 28%
|
|======================== | 30%
|
|========================== | 32%
|
|=========================== | 34%
|
|============================= | 36%
|
|============================== | 38%
|
|================================ | 40%
|
|================================== | 42%
|
|=================================== | 44%
|
|===================================== | 46%
|
|====================================== | 48%
|
|======================================== | 50%
|
|========================================== | 52%
|
|=========================================== | 54%
|
|============================================= | 56%
|
|============================================== | 58%
|
|================================================ | 60%
|
|================================================== | 62%
|
|=================================================== | 64%
|
|===================================================== | 66%
|
|====================================================== | 68%
|
|======================================================== | 70%
|
|========================================================== | 72%
|
|=========================================================== | 74%
|
|============================================================= | 76%
|
|============================================================== | 78%
|
|================================================================ | 80%
|
|================================================================== | 82%
|
|=================================================================== | 84%
|
|===================================================================== | 86%
|
|====================================================================== | 88%
|
|======================================================================== | 90%
|
|========================================================================== | 92%
|
|=========================================================================== | 94%
|
|============================================================================= | 96%
|
|============================================================================== | 98%
|
|================================================================================| 100%
... computing probabilities from permuted values ...
... done. [user: 10.568, system: 0.482, elapsed: 19.604 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.487, system: 0.823, elapsed: 45.223 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64