Last updated on 2025-10-03 01:49:50 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.88 | 258.48 | 271.36 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.47 | 233.75 | 243.22 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 330.32 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 355.03 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 190.00 | 211.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.26 | 285.36 | 300.62 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.01 | 267.16 | 282.17 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 177.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 18.00 | 189.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 175.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 241.00 | 265.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [81s/121s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.668, system: 0.083, elapsed: 2.550 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.276, system: 0.291, elapsed: 14.017 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.022, elapsed: 0.323 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.905, system: 0.273, elapsed: 5.432 seconds]
Computing values for grid cells...
... done. [user: 0.156, system: 0.006, elapsed: 0.171 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.735, system: 0.703, elapsed: 23.384 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.634, system: 0.087, elapsed: 2.084 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.253, system: 0.327, elapsed: 12.232 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.018, elapsed: 0.304 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.860, system: 0.239, elapsed: 5.798 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.005, elapsed: 0.273 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.629, system: 0.710, elapsed: 21.412 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.614, system: 0.061, elapsed: 2.479 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.003, system: 0.090, elapsed: 14.648 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.011, elapsed: 0.317 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.697, system: 0.167, elapsed: 6.253 seconds]
Computing values for grid cells...
... done. [user: 0.155, system: 0.003, elapsed: 0.254 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.135, system: 0.212, elapsed: 1.347 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.423, system: 0.566, elapsed: 26.383 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.435, system: 0.026, elapsed: 2.309 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.932, system: 0.046, elapsed: 14.526 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.011, elapsed: 0.308 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.669, system: 0.167, elapsed: 6.244 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.258 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.220, system: 0.437, elapsed: 17.396 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.273, system: 0.722, elapsed: 42.146 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/117s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.703, system: 0.094, elapsed: 2.436 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.105, system: 0.278, elapsed: 12.436 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.018, elapsed: 0.260 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.751, system: 0.280, elapsed: 5.776 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.007, elapsed: 0.225 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.422, system: 0.703, elapsed: 21.885 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.719, system: 0.088, elapsed: 2.468 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.134, system: 0.277, elapsed: 12.376 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.020, elapsed: 0.283 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.739, system: 0.244, elapsed: 5.211 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.006, elapsed: 0.191 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.494, system: 0.673, elapsed: 21.342 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.678, system: 0.083, elapsed: 2.097 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.080, system: 0.302, elapsed: 11.684 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.017, elapsed: 0.275 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.672, system: 0.242, elapsed: 6.181 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.012, elapsed: 0.382 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.049, system: 0.241, elapsed: 1.276 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.452, system: 0.940, elapsed: 22.924 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.533, system: 0.043, elapsed: 2.402 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.879, system: 0.105, elapsed: 13.813 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.178, system: 0.011, elapsed: 0.292 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.491, system: 0.156, elapsed: 7.455 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.005, elapsed: 0.416 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.923, system: 0.429, elapsed: 18.020 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.784, system: 0.773, elapsed: 43.606 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64