Last updated on 2024-07-22 01:49:25 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.6 | 402.84 | 431.74 | 834.58 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.1.6 | 262.68 | 336.26 | 598.94 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.1.6 | 988.80 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.6 | 1061.64 | NOTE | |||
| r-devel-windows-x86_64 | 1.1.6 | 235.00 | 327.00 | 562.00 | NOTE | |
| r-patched-linux-x86_64 | 1.1.6 | 221.62 | 436.99 | 658.61 | NOTE | |
| r-release-linux-x86_64 | 1.1.6 | 225.35 | 419.46 | 644.81 | ERROR | |
| r-release-macos-arm64 | 1.1.6 | 254.00 | NOTE | |||
| r-release-macos-x86_64 | 1.1.6 | 363.00 | NOTE | |||
| r-release-windows-x86_64 | 1.1.6 | 220.00 | 325.00 | 545.00 | NOTE | |
| r-oldrel-macos-arm64 | 1.1.6 | 271.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 1.1.6 | 572.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 1.1.6 | 309.00 | 408.00 | 717.00 | NOTE |
Version: 1.1.6
Check: for GNU extensions in Makefiles
Result: NOTE
GNU make is a SystemRequirements.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 1.1.6
Check: installed package size
Result: NOTE
installed size is 10.0Mb
sub-directories of 1Mb or more:
data 2.0Mb
doc 2.3Mb
libs 4.7Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 1.1.6
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘rstantools’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.1.6
Check: tests
Result: ERROR
Running ‘testthat.R’ [158s/157s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(isotracer)
To automatically run isotracer in parallel on a multicore CPU, you can call:
options(mc.cores = parallel::detectCores())
Attaching package: 'isotracer'
The following object is masked from 'package:stats':
filter
>
> test_check("isotracer")
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 503 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-steady-states-flows-pred.R:328:3'): Predictions for open network, multiple units, one steady, one split ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `purrr::map(seq_len(nrow(nm)), function(k) {
nmRow <- nm[k, ]
sizes <- list()
for (i in seq_len(nrow(to))) {
nmRow <- set_params(nmRow, to$mcmc.parameters[[i]], force = TRUE)
sizes[[i]] <- calculate_steady_state_one_row(nmRow)
}
out <- to
out$stable_sizes <- sizes
return(out)
})`: ℹ In index: 2.
Caused by error in `calculate_steady_state_one_row()`:
! Eigenvector incompatible with steady state compartments.
Backtrace:
▆
1. ├─isotracer::tidy_steady_states(m, r) at test-steady-states-flows-pred.R:328:3
2. │ └─purrr::map(...)
3. │ └─purrr:::map_("list", .x, .f, ..., .progress = .progress)
4. │ ├─purrr:::with_indexed_errors(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ ├─purrr:::call_with_cleanup(...)
7. │ └─isotracer (local) .f(.x[[i]], ...)
8. │ └─isotracer:::calculate_steady_state_one_row(nmRow)
9. │ └─base::stop("Eigenvector incompatible with steady state compartments.")
10. └─base::.handleSimpleError(...)
11. └─purrr (local) h(simpleError(msg, call))
12. └─cli::cli_abort(...)
13. └─rlang::abort(...)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 503 ]
Error: Test failures
Execution halted
Flavor: r-release-linux-x86_64