3d471598fdcbcbf57775f7da12b2e8a9 *DESCRIPTION
c98dbcb61e8de22ab58c5632f82146e8 *NAMESPACE
ce54324b210d00852f6f20058c4b67b5 *R/data.R
41fb06776e03cce1d1d25962f97a575b *R/delta.R
557b7b1c3f7dbe493fe309379601a5d1 *R/diffHTS-package.R
b511285299c464b110c3cbede1142087 *R/dose_response.R
b37082a91f056e480c2dbb0ff633b146 *R/hit_selection.R
10543910300b324b01835aa0033ead72 *R/module1_preqc.R
c38a14561df28cbf3eab42c28f8c52ac *R/module2_norm.R
968c8a57f6907afeb311c333a960cefa *R/module3_replicate.R
de20736745914aaf53252e6cdb35b762 *R/module4_primary.R
edf6da17bd5fb42a79987c01cc2bebe8 *R/module5_drc.R
962e139dc5251380de8efdc7e4021f34 *R/module6_auc_matrix.R
43ef4f5a42d81f3a970fc371fd1176e8 *R/module7_report.R
523618575fc0910688e2b5b79305cf72 *R/qc.R
646316db16e8dd784e640b0d7ed1b969 *R/theme_hts.R
8ba22854b2d1982ca11c580c39d98697 *R/utils.R
fce87761ac2827931d976e9004e54ebf *R/utils_hts.R
d7776150feeba82cbd440f174d1ba2fb *R/visualization.R
2c0439cce8864eb4c2a8a3ee9c6a71c0 *README.md
8225e0308036884f1130f03d1c197985 *build/vignette.rds
45991f5b074200859823c77a6e43b618 *data/hts_compound_meta.rda
70f968dc28dc4ceb0533d66f50bc7d4e *data/hts_dose_response.rda
a25907f8d3936dd0fd7a198d8413a602 *data/hts_plate_384.rda
c5f0cf527218e4f65119cca6083f46cd *data/hts_primary_raw.rda
4d14ac9fd8f7e3ad42406e235006ba35 *data/screen_delta_auc.rda
0eabfae975e766bbb486d5a9e3d1fb58 *data/screen_doseresponse.rda
1fcde5cabbd532cfbc201874b9af3f75 *data/screen_plate_layout.rda
923b6f60fc31d993c41acf8168dac0ec *data/screen_plate_qc.rda
d21e150eba806f91ae85786aab10e643 *inst/doc/diffHTS.R
ab518e58720d4139996d4f4f79948192 *inst/doc/diffHTS.Rmd
0cea344af3e93c7f250d56f444dccc72 *inst/doc/diffHTS.html
cb98a537290d1c6830848e80cb2cdbce *inst/extdata/plate_layout_example.csv
fb9fe2e81ecfa77b4a9fb70d38e180db *inst/rmd/report_template.Rmd
736ffe32812b673d5e5d3126ab61a1c0 *man/annotate_hit_info.Rd
b15fd031886bbcb1037c88117ecd43cd *man/apply_plate_layout.Rd
df8584ef1770358215bacafda0a3b9ef *man/baseline_subtract.Rd
23fbf27c313b7ef121c9f69152c812a2 *man/build_auc_matrix.Rd
7d01860b74c9b87e089743fd4999024c *man/calc_cv.Rd
0f6f461eeaa2524130356f4ed23af616 *man/calc_drc_auc.Rd
41983a024b8c2a08b03a1610b8b40c77 *man/calc_plate_qc.Rd
54bee12cccccdb1ffc68d34771a057df *man/calc_replicate_correlation.Rd
17c00232adfc3c981f9129a6e67ff82c *man/calc_replicate_cv.Rd
fa0ad3fdad23f67b629dc7d56ef24441 *man/calc_robust_z_prime.Rd
5e35c2664e31742cec7820cbd65957a7 *man/calc_sb_ratio.Rd
3cf8a8b9aaebd3bf34d3e150e6584c7f *man/calc_sn_ratio.Rd
d8a78e03dc48e908b27de233ae965a4a *man/calc_ssmd.Rd
c68292d1d3a1942fcadeb914d6fb6846 *man/calc_well_zscore.Rd
1065f162344bb38e991725e7e1dff73f *man/calc_z_factor.Rd
05ef02e5645977cb187be81f2a2d3273 *man/calc_z_prime.Rd
318706f8a95e9f9e7e4ac9f8068c97cc *man/calculate_qc_metrics.Rd
4064474c3c4b085ba9b26b28f7981b2c *man/check_control_label.Rd
9ad1c4478174364ac1d2f49c7633e7d5 *man/clean_compound_id.Rd
f7dc77a3f50b410de1d6973477585201 *man/clean_filename.Rd
fe8445bc8e4d5c063cf49444fc9cee51 *man/cluster_auc_matrix.Rd
43e20786074327b4c3a231a74d29e45c *man/compute_auc.Rd
50619ac51c6a73622b95cff051b68ed5 *man/compute_delta_auc.Rd
93fad82fc0d511e0d1c76fda8907c3d7 *man/convert_conc_log10.Rd
bcf92b24bd7512b3bebbe9ff480a680f *man/detect_outlier_wells.Rd
4c8e0c9968de0ad336bbaad6c1c801e4 *man/diffHTS-package.Rd
4bd21b011d4548a9c662947eaf5c42fa *man/export_hit_table.Rd
dab8757ed344a3748591518b72b74acb *man/extract_cluster_hit.Rd
24a8b32f70b7fb4bbe3a41f1b45cd52b *man/extract_drc_params.Rd
8d1f93551d0ba7264319df68e718c81d *man/filter_bad_replicate.Rd
ce1b24095ea9c57b80042e1915aebbb3 *man/filter_low_quality_curve.Rd
b8ad39513eaa0ff06cc2a3adc4412dac *man/filter_valid_plates.Rd
0baa33ec9d9c6f7d4503c5e001c0b90c *man/fit_4pl_curve.Rd
08911c9686d2d36520de86b4225e7aaf *man/fit_dose_response.Rd
9a696629fe909d04f392f1d3dbb28749 *man/flag_qc_plates.Rd
399b8ec86fd65e63bfa3fcbe66760cf2 *man/four_pl.Rd
070818ede801a2f0c2555baae736f411 *man/generate_hts_report.Rd
17823908813e961b018c700aae1c0b72 *man/hts_compound_meta.Rd
ee506cca73ea6878d7388f7f997dca40 *man/hts_dose_response.Rd
5bd7da8adc2870ffa08f29aff30ae2be *man/hts_pal.Rd
71d753245149f132d20bfacafe360c60 *man/hts_plate_384.Rd
0cee754b7436ec2329009e6495d1e4a9 *man/hts_primary_raw.Rd
484cf39a029bc52edbceca5c42d08413 *man/import_dose_response.Rd
eb290cfbefc398b12b3c0221660d1156 *man/merge_plate_data.Rd
16c14928bf8aac997fc83a136ea91ef8 *man/norm_by_control.Rd
6d81cf0114cf06b2e625f8cc62ba159a *man/plate_layout.Rd
65e1a5846d6636a386c3a85874456264 *man/plot_auc_heatmap.Rd
d9d664c98cacf5220a9a4188d4e51916 *man/plot_batch_drc_overlay.Rd
316c9da3fbe9a64b6081615221a6b650 *man/plot_cluster_tree.Rd
1f3d053605a6271500be8f2ac85fe29b *man/plot_condition_scatter.Rd
6c7168547b39e2b11173f2167bbdc3f6 *man/plot_control_scatter.Rd
4aa641e00ce2b1f4a7200d7666908b51 *man/plot_cv_distribution.Rd
2c1c788d59475bef17ff0e89c9dde546 *man/plot_delta_auc_heatmap.Rd
7041f85029b5b577b3efc9ddc6cf0c65 *man/plot_dose_response_curves.Rd
5c453f0d0780c48098cef38a53c9dbe0 *man/plot_hit_bar_count.Rd
2fb7c55fa3ca3b06f073af1338099cc7 *man/plot_hit_stratify_bar.Rd
cfa783de7b9f87aba52af2c7f48c5366 *man/plot_ic50_auc_cor.Rd
6a3cb7c5e50a6d3f32b6b86306050f75 *man/plot_inhibition_hist.Rd
57e1bc4cdbad854822b25e7e8f2fa2ce *man/plot_plate_heatmap.Rd
06c8449843544273f0e1a1571934f9e0 *man/plot_plate_heatmap_inhibition.Rd
02fe2fe7b3d3908a5976c175793a3c7a *man/plot_plate_heatmap_raw.Rd
d3b6d528785edd7b24d74835dc3ec475 *man/plot_plate_qc.Rd
d3c725f80d57cd0732dfc85096639a59 *man/plot_primary_inhibition_rank.Rd
9c17b70622787cf07a23ef4931fff0ae *man/plot_primary_secondary_cor.Rd
74a6d1d110db3b68f55ef1029545123f *man/plot_qc_boxplot.Rd
3dafbc9bc38c4e5f9e0f31ab861e2f17 *man/plot_qc_circular_heatmap.Rd
22b06d977175c83d9229e6710245d21b *man/plot_qc_metric_circular.Rd
263999492c331782e7edbac050b7e827 *man/plot_qc_metric_trend.Rd
5dc98f594938f7d9a2242097223ab1b6 *man/plot_replicate_scatter.Rd
51eb536fbf6d331d62ae2dfb4757477c *man/plot_sigma_hits.Rd
cb75a6fa34ea99da3b59cd15c8555647 *man/plot_single_drc.Rd
be67621dfe0d45c69394faa30e4c0814 *man/rank_hit_compound.Rd
1714d9d50d2ebd1f22a651208691758c *man/read_hts_plate.Rd
bb47a2f960e382104b176c3a8e84d6ab *man/read_plate_layout.Rd
184be83c1168936d8c91f2858ccc1d63 *man/screen_delta_auc.Rd
49d630ee4c8f5979f4fd85282f973f78 *man/screen_doseresponse.Rd
c361e2a6a54bcea0c21391cd3a558ef8 *man/screen_plate_layout.Rd
61d07553ab47ce1375e9998389c36d34 *man/screen_plate_qc.Rd
d9cb7b22116c995379f72ec4293a0e0e *man/select_hits_cutoff.Rd
b3ab08a8768cf302449df350b6909d46 *man/select_hits_sigma.Rd
897657755b89940baba326fcbcd7251c *man/select_primary_hit.Rd
ced84097ed0e3ce7c44ef20f035fc4a1 *man/select_sigma_hits.Rd
7b052a303854a5a00e651e224526e8b3 *man/summarize_plate_setup.Rd
64575f2b199a6544862eef42bb05a39d *man/summarize_primary_hit.Rd
efc2df8ee5d8311643adb03393a45e6b *man/summarize_sigma_hits.Rd
337b14f5d5b2e1bad5e2e87735879f6c *man/theme_hts.Rd
06547fe06d5039dc69f49375a60e5b0d *man/windows_to_linux_path.Rd
06fbc7f286eaf4787caf9464ada6a8cd *tests/testthat.R
612cd57afb1064687222bc5b892f02d0 *tests/testthat/test-delta.R
32f2c3f6289cb1d5156a430d0ddc98c7 *tests/testthat/test-dose_response.R
1bba415f90b0708441cfb592bff7e06c *tests/testthat/test-hit_selection.R
0ea349a96cf5f4d917591ede89b6add0 *tests/testthat/test-modules.R
2f4bbef1edb63236c7dd1a28343187cd *tests/testthat/test-qc.R
77057a25f56df9234a2b36a63d3028ae *tests/testthat/test-utils.R
2fec82fec88fda14c74ba70a19c3dc8b *tests/testthat/test-visualization.R
ab518e58720d4139996d4f4f79948192 *vignettes/diffHTS.Rmd
