Parameter fitting log

R environment

Session information and package versions.

• R version 4.3.0 (2023-04-21 ucrt)
• cvasi version: 1.5.0
• Platform: x86_64-w64-mingw32/x64 (64-bit)
• Running under: Windows 11 x64 (build 22631)
• Matrix products: default
• Locale: LC_COLLATE=English_United Kingdom.utf8, LC_CTYPE=English_United Kingdom.utf8, LC_MONETARY=English_United Kingdom.utf8, LC_NUMERIC=C, LC_TIME=English_United Kingdom.utf8
• Attached base packages: stats, graphics, grDevices, utils, datasets, methods, base

Other attached packages

name	version
none	-

Loaded via namespace (not attached)

name	version
digest	0.6.37
R6	2.5.1
fastmap	1.2.0
xfun	0.48
cachem	1.1.0
knitr	1.48
htmltools	0.5.8.1
rmarkdown	2.28
lifecycle	1.0.4
cli	3.6.3
sass	0.4.9
jquerylib	0.1.4
compiler	4.3.0
rstudioapi	0.16.0
tools	4.3.0
evaluate	1.0.1
bslib	0.8.0
yaml	2.3.10
rlang	1.1.6
jsonlite	1.8.9

Configuration

calibration settings start values (> calibrate) error function (> calibrate) optim method > calibrate parameter boundaries (if used) > calibrate solver settings (method, rtol, atol?) > impossible atm

Experimental data

trial data by trial id observed > fit/cs weights? > fit/cs exposure > fit/cs

Fitted scenarios

scenario infos by trial id > fit, attach calisets name
parameters initial state transfers forcings

Results

The parameter fit was SUCCESSFUL.

Fitted parameter values

• k_phot_max: 0.43924768080379

Confidence intervals

Calculated using the Hessian matrix (5 degrees of freedom):

• k_phot_max: [0.435700121589848; 0.442795240017733]

Additional outputs

• Error function value: 0.0171346 (log_sse)
• Convergence: 0 (successful)
• Message: none

Hessian matrix

	k_phot_max
k_phot_max	1046.022

Hessian matrix

	k_phot_max
k_phot_max	1046.022

fit result > fit return value obs vs pred (original, if necessary) > fit ✓ obs vs pred vs residuals (can be transformed) > fit ✓