A	A
A.wrapper	A.wrapper
AA.df.check	AA.df.check
AA.df.cs	AA.df.cs
AAtable.builder	AAtable.builder
AlignmentFilter	AlignmentFilter
AlignObj.Create	AlignObj.Create
AlignObj.Update	AlignObj.Update
Append.System	Append.System
BIGDAWG	BIGDAWG
Build.Matrix	Build.Matrix
buildHAPnames	buildHAPnames
buildHAPsets	buildHAPsets
cci	cci
cci.pval	cci.pval
cci.pval.list	cci.pval.list
Check.Cores	Check.Cores
Check.Data	Check.Data
Check.Params	Check.Params
Check.Params.GLS	Check.Params.GLS
CheckAlleles	CheckAlleles
CheckHLA	CheckHLA
CheckLoci	CheckLoci
CheckRelease	CheckRelease
CheckString.Allele	CheckString.Allele
CheckString.Locus	CheckString.Locus
Condense.EPL	Condense.EPL
Create.Null.Table	Create.Null.Table
DRB345.Check.Wrapper	DRB345.Check.Wrapper
DRB345.Check.Zygosity	DRB345.Check.Zygosity
DRB345.Exp	DRB345.Exp
DRB345.parser	DRB345.parser
Err.Log	Err.Log
EVSremoval	EVSremoval
Exon.Filter	Exon.Filter
ExonPtnAlign.Create	ExonPtnAlign.Create
ExonPtnList	ExonPtnList
Filler	Filler
Format.Allele	Format.Allele
Format.Tab	Format.Tab
getAllele.Count	getAllele.Count
getCS.Mat	getCS.Mat
getCS.stat	getCS.stat
GetField	GetField
getFileName	getFileName
GetFiles	GetFiles
getHap	getHap
getObsFreq	getObsFreq
GL2Tab.Loci	GL2Tab.Loci
GL2Tab.Sub	GL2Tab.Sub
GL2Tab.wrapper	GL2Tab.wrapper
GLSconvert	GLSconvert
H.MC	H.MC
H.MC.wrapper	H.MC.wrapper
HLA_data	HLA_data
HWE	HWE
HWE.ChiSq	HWE.ChiSq
HWE.wrapper	HWE.wrapper
L	L
L.wrapper	L.wrapper
make2x2	make2x2
makeComb	makeComb
MergeData_Output	MergeData_Output
PgrpExtract	PgrpExtract
PgrpFormat	PgrpFormat
PreCheck	PreCheck
prepData	prepData
rmABstrings	rmABstrings
RunChiSq	RunChiSq
RunChiSq_c	RunChiSq_c
Stripper	Stripper
summaryGeno.2	summaryGeno.2
Tab2GL.Loci	Tab2GL.Loci
Tab2GL.Sub	Tab2GL.Sub
Tab2GL.wrapper	Tab2GL.wrapper
TableMaker	TableMaker
UpdateRelease	UpdateRelease
