If your system crashes or locks up for some reason, the system won't have an opportunity to cleanly unmount your filesystems. When this happens, the filesystems are left in an inconsistent (unpredictable) state. When the system reboots, the fsck program will detect that the filesystems were not cleanly unmounted and will want to perform a consistency check of filesystems listed in /etc/fstab.

An important note -- for a filesystem to be checked by fsck, it must have a non-zero number in the "pass" field (the last field) in /etc/fstab. Typically, the root filesystem is set to a passno of 1, specifying that it should be checked first. All other filesystems that should be checked at startup time should have a passno of 2 or higher.

Sometimes, you may find that after a reboot fsck is unable to fully repair a partially damaged filesystem. In these instances, all you need to do is to bring your system down to single-user mode and run fsck manually, supplying the partition block device as an argument. As fsck performs its filesystem repairs, it may ask you whether to fix particular filesystem defects. In general, you should say y (yes) to all these questions and allow fsck to do it's thing.