Fits Bayesian linear mixed models for spatial and space-time data with fixed effects, independent and identically distributed (iid) grouped random effects, and structured latent processes. The formula interface supports first-order autoregressive (AR(1)) effects, dense Gaussian processes, nearest-neighbor Gaussian processes, proper and Leroux conditional autoregressive (CAR) effects, ordered directed acyclic graph autoregressive (DAGAR) effects, separable CAR-time and DAGAR-time effects, and spatially varying coefficients. The sampler uses sparse precision matrix calculations when available and includes post-fitting tools for latent process recovery, fitted values, prediction, pointwise log likelihoods, and posterior sample extraction. Method details include Datta et al. (2016) <doi:10.1080/01621459.2015.1044091>, Finley et al. (2019) <doi:10.1080/10618600.2018.1537924>, Datta et al. (2019) <doi:10.1214/19-BA1177>, and May and Finley (2025) <doi:10.1016/j.spasta.2025.100917>.
| Version: | 0.0.2 |
| Depends: | R (≥ 4.4.0) |
| Imports: | BayesLogit (≥ 2.4), coda, Matrix (≥ 1.7-0), stats |
| LinkingTo: | BayesLogit (≥ 2.4), Matrix (≥ 1.7-0) |
| Suggests: | ggplot2, knitr, loo, quarto, sf, testthat (≥ 3.0.0) |
| Published: | 2026-07-28 |
| DOI: | 10.32614/CRAN.package.stLMM (may not be active yet) |
| Author: | Andrew O. Finley [aut, cre], Sudipto Banerjee [ctb], Abhirup Datta [ctb], Paul B. May [ctb] |
| Maintainer: | Andrew O. Finley <finleya at msu.edu> |
| BugReports: | https://github.com/finleya/stLMM/issues |
| License: | GPL (≥ 3) |
| Copyright: | see file COPYRIGHTS |
| URL: | https://github.com/finleya/stLMM, https://finleya.github.io/stLMM/ |
| NeedsCompilation: | yes |
| Materials: | README |
| CRAN checks: | stLMM results |
| Reference manual: | stLMM.html , stLMM.pdf |
| Vignettes: |
01. Getting started with stLMM (source, R code) 02. Spatial NNGP models with stLMM (source, R code) |
| Package source: | stLMM_0.0.2.tar.gz |
| Windows binaries: | r-devel: not available, r-release: not available, r-oldrel: not available |
| macOS binaries: | r-release (arm64): not available, r-oldrel (arm64): not available, r-release (x86_64): not available, r-oldrel (x86_64): not available |
Please use the canonical form https://CRAN.R-project.org/package=stLMM to link to this page.