Package: Hmsc
Title: Hierarchical Model of Species Communities
Type: Package
Version: 3.3-7
Authors@R: c(person(given = "Gleb", family="Tikhonov", role="aut"),
   person(given="Otso", family="Ovaskainen",
      email="otso.t.ovaskainen@jyu.fi",
      comment = c(ORCID="0000-0001-9750-4421"), role=c("aut", "cre")),
   person(given="Jari", family="Oksanen", role=c("aut"),
   email="jhoksane@gmail.com"),
   person(given="Melinda", family=c("de", "Jonge"), role="aut"),
   person(given="Oystein", family="Opedal", role="aut"),
   person(given="Tad", family="Dallas", role="aut"))
Description: Hierarchical Modelling of Species Communities (HMSC) is
   a model-based approach for analyzing community ecological data. 
   This package implements it in the Bayesian framework with Gibbs
   Markov chain Monte Carlo (MCMC) sampling (Tikhonov et al. (2020)
   <doi:10.1111/2041-210X.13345>).
License: GPL-3 | file LICENSE
URL:
        https://www.helsinki.fi/en/researchgroups/statistical-ecology/software/hmsc
BugReports: https://github.com/hmsc-r/HMSC/issues/
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.2
Suggests: R.rsp, testthat, corrplot
VignetteBuilder: R.rsp
Depends: R (>= 3.0.2), coda
Imports: abind, ape, BayesLogit, fields, FNN, ggplot2, MASS, Matrix,
        matrixStats, MCMCpack, methods, nnet, rlang, parallel, pracma,
        pROC, sp, statmod, truncnorm
NeedsCompilation: no
Packaged: 2025-08-26 18:22:11 UTC; jarioksa
Author: Gleb Tikhonov [aut],
  Otso Ovaskainen [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-9750-4421>),
  Jari Oksanen [aut],
  Melinda de Jonge [aut],
  Oystein Opedal [aut],
  Tad Dallas [aut]
Maintainer: Otso Ovaskainen <otso.t.ovaskainen@jyu.fi>
Repository: CRAN
Date/Publication: 2025-08-28 22:30:16 UTC
Built: R 4.7.0; ; 2026-07-27 03:31:51 UTC; windows
