Package: limorhyde
Title: Differential Analysis of Rhythmic Transcriptome Data
Version: 1.0.3
Authors@R: c(
  person('Jake', 'Hughey', , 'jakejhughey@gmail.com', c('aut', 'cre')), 
  person('Jordan', 'Singer', , 'jordan.m.singer@vumc.org', 'ctb'))
Description: A flexible approach, inspired by cosinor regression, for
  differential analysis of rhythmic transcriptome data. See Singer and Hughey
  (2018) <doi:10.1177/0748730418813785>.
Depends: R (>= 3.5.0)
License: GPL-2
URL: https://limorhyde.hugheylab.org,
        https://github.com/hugheylab/limorhyde
Encoding: UTF-8
RoxygenNote: 7.3.3
Imports: pbs (>= 1.1)
Suggests: annotate (>= 1.58.0), data.table (>= 1.12.2), foreach (>=
        1.4.4), ggplot2 (>= 2.2.1), knitr (>= 1.20), limma (>= 3.36.1),
        matrixStats (>= 0.56.0), org.Mm.eg.db (>= 3.6.0), rmarkdown (>=
        1.9), testthat (>= 3.0.4)
VignetteBuilder: knitr
BugReports: https://github.com/hugheylab/limorhyde/issues
NeedsCompilation: no
Packaged: 2026-01-20 10:06:00 UTC; jakehughey
Author: Jake Hughey [aut, cre],
  Jordan Singer [ctb]
Maintainer: Jake Hughey <jakejhughey@gmail.com>
Repository: CRAN
Date/Publication: 2026-01-20 10:20:16 UTC
Built: R 4.7.0; ; 2026-07-27 02:21:00 UTC; windows
