# Generated by roxygen2: do not edit by hand

S3method(coef,POUMM)
S3method(fitted,POUMM)
S3method(logLik,POUMM)
S3method(nobs,POUMM)
S3method(plot,POUMM)
S3method(plot,summary.POUMM)
S3method(residuals,POUMM)
S3method(statistics,POUMM)
S3method(summary,POUMM)
export(H2)
export(H2e)
export(POUMM)
export(POUMMIsADevRelease)
export(alpha)
export(covFunPOUMM)
export(covHPDFunPOUMM)
export(covPOUMM)
export(covVTipsGivenTreePOUMM)
export(dOU)
export(dVNodesGivenTreePOUMM)
export(likPOUMMGivenTreeVTips)
export(likPOUMMGivenTreeVTipsC)
export(meanOU)
export(nodeTimes)
export(pruneTree)
export(rOU)
export(rTrajectoryOU)
export(rVNodesGivenTreePOUMM)
export(sdOU)
export(sigmaOU)
export(sigmae)
export(simulatePOUMMLikelihoodMainLoop)
export(simulateTrait)
export(specifyPMM)
export(specifyPMM_H2tMeanSe)
export(specifyPMM_H2tMeanSeG0)
export(specifyPMM_SSeG0)
export(specifyPOUMM)
export(specifyPOUMM_ATH2tMeanSe)
export(specifyPOUMM_ATH2tMeanSeG0)
export(specifyPOUMM_ATS)
export(specifyPOUMM_ATSG0)
export(specifyPOUMM_ATSSeG0)
export(statistics)
export(validateSpecPOUMM)
export(varOU)
import(Rcpp)
import(ape)
import(coda)
import(data.table)
import(ggplot2)
import(methods)
importFrom(adaptMCMC,MCMC)
importFrom(adaptMCMC,convert.to.coda)
importFrom(ape,rTraitCont)
importFrom(coda,HPDinterval)
importFrom(coda,as.mcmc.list)
importFrom(coda,effectiveSize)
importFrom(coda,gelman.diag)
importFrom(coda,mcmc)
importFrom(coda,thin)
importFrom(foreach,"%do%")
importFrom(foreach,"%dopar%")
importFrom(foreach,foreach)
importFrom(graphics,par)
importFrom(graphics,plot)
importFrom(lamW,lambertW0)
importFrom(stats,AIC)
importFrom(stats,coef)
importFrom(stats,complete.cases)
importFrom(stats,cor)
importFrom(stats,dexp)
importFrom(stats,dnorm)
importFrom(stats,dunif)
importFrom(stats,end)
importFrom(stats,fitted)
importFrom(stats,logLik)
importFrom(stats,nobs)
importFrom(stats,optim)
importFrom(stats,reorder)
importFrom(stats,rexp)
importFrom(stats,rnorm)
importFrom(stats,runif)
importFrom(stats,sd)
importFrom(stats,start)
importFrom(stats,var)
importFrom(stats,window)
importFrom(utils,packageDescription)
useDynLib(POUMM)
