Retrieve, Transform and Analyze the Barcode of Life Data Systems
Data
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Documentation for package ‘BOLDconnectR’ version 1.0.0
Help Pages
| bold.analyze.align | Transform and align the sequence data retrieved from BOLD |
| bold.analyze.diversity | Create a biodiversity profile of the retrieved data |
| bold.analyze.map | Visualize BIN occurrence data on maps |
| bold.analyze.tree | Analyze and visualize the multiple sequence alignment |
| bold.apikey | Set the BOLD private data API key |
| bold.data.summarize | Generate specific summaries from the downloaded BCDM data |
| bold.export | Export files generated by BOLDconnectR |
| bold.fetch | Retrieve data from the BOLD database |
| bold.fields.info | Retrieve metadata of the BOLD data fields |
| bold.full.search | Search user based (private) and publicly available data on the BOLD database |
| bold.public.search | Search publicly available data on the BOLD database |
| test.data | Canadian spider data by Blagoev et al.(2015) |